A Python simulation of circadian dynamics in the suprachiasmatic nuclei of the mouse hypothalamus.
Requires NumPy, SciPy, Matplotlib, and other packages listed in circadian/req1.txt and circadian.req2.txt
__init__.py) should be in your
$PYTHONPATH environment variable to allow you to import this.
Or, you can open a python prompt in the
directory above that (the same as this file) and you should be able to
import circadian. Or, you should be able to
python scripts/runMe.py in this directory to see some results,
python scripts/runTests.py or just
make tests to run the tests.
Some of the tests additionally require SymPy.